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Cluster: Rep_2087_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2087_c_43 Rep_2087_c_43_14 8455 10266 + 3.A.25.1.1
CAZyme Rep_2087_c_43 Rep_2087_c_43_15 10718 12766 + CBM34 | GH13_39
pfam Rep_2087_c_43 Rep_2087_c_43_16 13347 13655 + YjbR
peptidase Rep_2087_c_43 Rep_2087_c_43_17 13970 15103 + M20.UPW
TC Rep_2087_c_43 Rep_2087_c_43_18 15121 16071 + 3.A.1.5.20
TC Rep_2087_c_43 Rep_2087_c_43_19 16087 16938 + 3.A.1.5.20
TC Rep_2087_c_43 Rep_2087_c_43_20 16953 18623 + 3.A.1.5.20
TC Rep_2087_c_43 Rep_2087_c_43_21 18675 19691 + 3.A.1.5.12
TC Rep_2087_c_43 Rep_2087_c_43_22 19691 20668 + 3.A.1.5.20
Gene ID: Rep_2087_c_43_14
Type: TC
Location: 8455 - 10266 (+)
Gene ID: Rep_2087_c_43_15
Type: CAZyme
Location: 10718 - 12766 (+)
Gene ID: Rep_2087_c_43_16
Type: pfam
Location: 13347 - 13655 (+)
Gene ID: Rep_2087_c_43_17
Type: peptidase
Location: 13970 - 15103 (+)
Gene ID: Rep_2087_c_43_18
Type: TC
Location: 15121 - 16071 (+)
Gene ID: Rep_2087_c_43_19
Type: TC
Location: 16087 - 16938 (+)
Gene ID: Rep_2087_c_43_20
Type: TC
Location: 16953 - 18623 (+)
Gene ID: Rep_2087_c_43_21
Type: TC
Location: 18675 - 19691 (+)
Gene ID: Rep_2087_c_43_22
Type: TC
Location: 19691 - 20668 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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