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Cluster: Rep_2087_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2087_c_38 Rep_2087_c_38_3 2577 3401 - 3.A.1.5.2
CAZyme Rep_2087_c_38 Rep_2087_c_38_4 3580 4302 + CE4
STP Rep_2087_c_38 Rep_2087_c_38_5 4312 5640 + AAA
TC Rep_2087_c_38 Rep_2087_c_38_6 5860 7311 + 3.A.6.3.1
TF Rep_2087_c_38 Rep_2087_c_38_7 7330 8112 + 0040266
peptidase Rep_2087_c_38 Rep_2087_c_38_8 8132 9553 + M38.UNW
TC Rep_2087_c_38 Rep_2087_c_38_9 9666 11045 + 2.A.66.1.28
TC Rep_2087_c_38 Rep_2087_c_38_10 11174 11947 - 3.A.1.34.1
TC Rep_2087_c_38 Rep_2087_c_38_11 11940 12830 - 3.A.1.34.1
TC Rep_2087_c_38 Rep_2087_c_38_12 12881 13993 - 3.A.1.34.1
TC Rep_2087_c_38 Rep_2087_c_38_13 14645 16486 + 3.A.16.1.2
NULL(UNKNOWN) Rep_2087_c_38 Rep_2087_c_38_14 16724 17806 + NULL(UNKNOWN)
[View Structural Homologs]
STP Rep_2087_c_38 Rep_2087_c_38_15 17924 19678 - Fer4
TC Rep_2087_c_38 Rep_2087_c_38_16 19691 21589 - 3.D.1.5.1
TC Rep_2087_c_38 Rep_2087_c_38_17 21586 22071 - 3.D.1.5.1
Gene ID: Rep_2087_c_38_3
Type: TC
Location: 2577 - 3401 (-)
Gene ID: Rep_2087_c_38_4
Type: CAZyme
Location: 3580 - 4302 (+)
Gene ID: Rep_2087_c_38_5
Type: STP
Location: 4312 - 5640 (+)
Gene ID: Rep_2087_c_38_6
Type: TC
Location: 5860 - 7311 (+)
Gene ID: Rep_2087_c_38_7
Type: TF
Location: 7330 - 8112 (+)
Gene ID: Rep_2087_c_38_8
Type: peptidase
Location: 8132 - 9553 (+)
Gene ID: Rep_2087_c_38_9
Type: TC
Location: 9666 - 11045 (+)
Gene ID: Rep_2087_c_38_10
Type: TC
Location: 11174 - 11947 (-)
Gene ID: Rep_2087_c_38_11
Type: TC
Location: 11940 - 12830 (-)
Gene ID: Rep_2087_c_38_12
Type: TC
Location: 12881 - 13993 (-)
Gene ID: Rep_2087_c_38_13
Type: TC
Location: 14645 - 16486 (+)
Gene ID: Rep_2087_c_38_14
Type:
Location: 16724 - 17806 (+)
Gene ID: Rep_2087_c_38_15
Type: STP
Location: 17924 - 19678 (-)
Gene ID: Rep_2087_c_38_16
Type: TC
Location: 19691 - 21589 (-)
Gene ID: Rep_2087_c_38_17
Type: TC
Location: 21586 - 22071 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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