Cluster: Rep_2087_CGC14
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2087
- CGC Family ID: CGCFAM_05523
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2087_c_37 | Rep_2087_c_37_6 | 4797 | 6257 | - | 2.A.66.6.1 |
| CAZyme | Rep_2087_c_37 | Rep_2087_c_37_7 | 6238 | 7662 | - | GT4 |
| pfam | Rep_2087_c_37 | Rep_2087_c_37_8 | 7679 | 9526 | - | DUF2194 | DUF2334 |
| NULL(UNKNOWN) | Rep_2087_c_37 | Rep_2087_c_37_9 | 9514 | 10398 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_2087_c_37 | Rep_2087_c_37_10 | 10503 | 13397 | - | 8.A.59.4.1 |
Gene ID: Rep_2087_c_37_6
Type: TC
Location: 4797 - 6257 (-)
Type: TC
Location: 4797 - 6257 (-)
Gene ID: Rep_2087_c_37_7
Type: CAZyme
Location: 6238 - 7662 (-)
Type: CAZyme
Location: 6238 - 7662 (-)
Gene ID: Rep_2087_c_37_8
Type: pfam
Location: 7679 - 9526 (-)
Type: pfam
Location: 7679 - 9526 (-)
Gene ID: Rep_2087_c_37_9
Type:
Location: 9514 - 10398 (-)
Type:
Location: 9514 - 10398 (-)
Gene ID: Rep_2087_c_37_10
Type: TC
Location: 10503 - 13397 (-)
Type: TC
Location: 10503 - 13397 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Alitiscatomonas
Species
Alitiscatomonas sp902477765
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.