dbCAN Logo

Cluster: Rep_2087_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2087_c_30 Rep_2087_c_30_18 20038 21414 + 9.A.40.1.2
TC Rep_2087_c_30 Rep_2087_c_30_19 21764 23299 + 2.A.68.1.1
peptidase Rep_2087_c_30 Rep_2087_c_30_20 23765 25699 - S09.UPC
peptidase Rep_2087_c_30 Rep_2087_c_30_21 25881 26609 + M20.UNW
TC Rep_2087_c_30 Rep_2087_c_30_22 27015 28154 + 9.B.34.1.4
pfam Rep_2087_c_30 Rep_2087_c_30_23 28238 29257 - Collagen | Collagen
TC Rep_2087_c_30 Rep_2087_c_30_24 29800 31422 + 2.A.35.2.1
TC Rep_2087_c_30 Rep_2087_c_30_25 31439 33175 - 3.A.1.106.2
CAZyme Rep_2087_c_30 Rep_2087_c_30_26 33405 34178 + GH25
Gene ID: Rep_2087_c_30_18
Type: TC
Location: 20038 - 21414 (+)
Gene ID: Rep_2087_c_30_19
Type: TC
Location: 21764 - 23299 (+)
Gene ID: Rep_2087_c_30_20
Type: peptidase
Location: 23765 - 25699 (-)
Gene ID: Rep_2087_c_30_21
Type: peptidase
Location: 25881 - 26609 (+)
Gene ID: Rep_2087_c_30_22
Type: TC
Location: 27015 - 28154 (+)
Gene ID: Rep_2087_c_30_23
Type: pfam
Location: 28238 - 29257 (-)
Gene ID: Rep_2087_c_30_24
Type: TC
Location: 29800 - 31422 (+)
Gene ID: Rep_2087_c_30_25
Type: TC
Location: 31439 - 33175 (-)
Gene ID: Rep_2087_c_30_26
Type: CAZyme
Location: 33405 - 34178 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List