Cluster: Rep_2087_CGC10
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2087
- CGC Family ID: CGCFAM_00972
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2087_c_29 | Rep_2087_c_29_27 | 25561 | 26955 | - | 2.A.66.1.13 |
| NULL(UNKNOWN) | Rep_2087_c_29 | Rep_2087_c_29_28 | 27130 | 28329 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_2087_c_29 | Rep_2087_c_29_29 | 28458 | 31586 | - | GT27 |
| NULL(UNKNOWN) | Rep_2087_c_29 | Rep_2087_c_29_30 | 31583 | 32497 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_2087_c_29 | Rep_2087_c_29_31 | 32500 | 33858 | - | 3.A.1.103.6 |
Gene ID: Rep_2087_c_29_27
Type: TC
Location: 25561 - 26955 (-)
Type: TC
Location: 25561 - 26955 (-)
Gene ID: Rep_2087_c_29_28
Type:
Location: 27130 - 28329 (-)
Type:
Location: 27130 - 28329 (-)
Gene ID: Rep_2087_c_29_29
Type: CAZyme
Location: 28458 - 31586 (-)
Type: CAZyme
Location: 28458 - 31586 (-)
Gene ID: Rep_2087_c_29_30
Type:
Location: 31583 - 32497 (-)
Type:
Location: 31583 - 32497 (-)
Gene ID: Rep_2087_c_29_31
Type: TC
Location: 32500 - 33858 (-)
Type: TC
Location: 32500 - 33858 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Alitiscatomonas
Species
Alitiscatomonas sp902477765
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.