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Cluster: Rep_2083_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2083_c_3 Rep_2083_c_3_50 53818 55266 + 3.B.1.1.5
pfam Rep_2083_c_3 Rep_2083_c_3_51 55284 56060 + OAD_gamma
TC Rep_2083_c_3 Rep_2083_c_3_52 56082 56444 + 3.B.1.1.2
TC Rep_2083_c_3 Rep_2083_c_3_53 56484 57632 + 3.B.1.1.3
TC Rep_2083_c_3 Rep_2083_c_3_54 57700 59112 + 3.B.1.1.6
CAZyme Rep_2083_c_3 Rep_2083_c_3_55 59338 61590 + GH73
Gene ID: Rep_2083_c_3_50
Type: TC
Location: 53818 - 55266 (+)
Gene ID: Rep_2083_c_3_51
Type: pfam
Location: 55284 - 56060 (+)
Gene ID: Rep_2083_c_3_52
Type: TC
Location: 56082 - 56444 (+)
Gene ID: Rep_2083_c_3_53
Type: TC
Location: 56484 - 57632 (+)
Gene ID: Rep_2083_c_3_54
Type: TC
Location: 57700 - 59112 (+)
Gene ID: Rep_2083_c_3_55
Type: CAZyme
Location: 59338 - 61590 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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