Cluster: Rep_2083_CGC3
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2083
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2083_c_1 | Rep_2083_c_1_69 | 67358 | 68005 | + | 9.B.104.1.3 |
| pfam | Rep_2083_c_1 | Rep_2083_c_1_70 | 68082 | 68498 | + | HIT | DcpS_C |
| CAZyme | Rep_2083_c_1 | Rep_2083_c_1_71 | 68563 | 69645 | - | GT28 |
Gene ID: Rep_2083_c_1_69
Type: TC
Location: 67358 - 68005 (+)
Type: TC
Location: 67358 - 68005 (+)
Gene ID: Rep_2083_c_1_70
Type: pfam
Location: 68082 - 68498 (+)
Type: pfam
Location: 68082 - 68498 (+)
Gene ID: Rep_2083_c_1_71
Type: CAZyme
Location: 68563 - 69645 (-)
Type: CAZyme
Location: 68563 - 69645 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Brotaphodocola
Species
Brotaphodocola sp003478505
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.