Cluster: Rep_2083_CGC20
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_2083
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2083_c_37 | Rep_2083_c_37_17 | 18069 | 19013 | - | GT2 |
| NULL(UNKNOWN) | Rep_2083_c_37 | Rep_2083_c_37_18 | 19003 | 20301 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_2083_c_37 | Rep_2083_c_37_19 | 20377 | 21090 | - | GT2 |
| STP | Rep_2083_c_37 | Rep_2083_c_37_20 | 21087 | 22211 | - | Aminotran_1_2 |
| pfam | Rep_2083_c_37 | Rep_2083_c_37_21 | 22211 | 23224 | - | ATP-grasp_3 | CPSase_L_D2 | ATPgrasp_Ter | PylC-like_N |
| TC | Rep_2083_c_37 | Rep_2083_c_37_22 | 23228 | 24697 | - | 2.A.66.2.23 |
| CAZyme | Rep_2083_c_37 | Rep_2083_c_37_23 | 24801 | 25835 | - | GT2 |
Gene ID: Rep_2083_c_37_17
Type: CAZyme
Location: 18069 - 19013 (-)
Type: CAZyme
Location: 18069 - 19013 (-)
Gene ID: Rep_2083_c_37_18
Type:
Location: 19003 - 20301 (-)
Type:
Location: 19003 - 20301 (-)
Gene ID: Rep_2083_c_37_19
Type: CAZyme
Location: 20377 - 21090 (-)
Type: CAZyme
Location: 20377 - 21090 (-)
Gene ID: Rep_2083_c_37_20
Type: STP
Location: 21087 - 22211 (-)
Type: STP
Location: 21087 - 22211 (-)
Gene ID: Rep_2083_c_37_21
Type: pfam
Location: 22211 - 23224 (-)
Type: pfam
Location: 22211 - 23224 (-)
Gene ID: Rep_2083_c_37_22
Type: TC
Location: 23228 - 24697 (-)
Type: TC
Location: 23228 - 24697 (-)
Gene ID: Rep_2083_c_37_23
Type: CAZyme
Location: 24801 - 25835 (-)
Type: CAZyme
Location: 24801 - 25835 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Brotaphodocola
Species
Brotaphodocola sp003478505
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.