Cluster: Rep_2083_CGC19
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2083
- CGC Family ID: CGCFAM_03786
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2083_c_33 | Rep_2083_c_33_16 | 14853 | 16136 | + | 2.A.56.1.6 |
| CAZyme | Rep_2083_c_33 | Rep_2083_c_33_17 | 16155 | 17315 | + | GH33 |
| pfam | Rep_2083_c_33 | Rep_2083_c_33_18 | 17329 | 17775 | + | DUF386 |
| pfam | Rep_2083_c_33 | Rep_2083_c_33_19 | 17821 | 18717 | + | DHDPS |
| TC | Rep_2083_c_33 | Rep_2083_c_33_20 | 18745 | 19698 | + | 2.A.10.1.4 |
Gene ID: Rep_2083_c_33_16
Type: TC
Location: 14853 - 16136 (+)
Type: TC
Location: 14853 - 16136 (+)
Gene ID: Rep_2083_c_33_17
Type: CAZyme
Location: 16155 - 17315 (+)
Type: CAZyme
Location: 16155 - 17315 (+)
Gene ID: Rep_2083_c_33_18
Type: pfam
Location: 17329 - 17775 (+)
Type: pfam
Location: 17329 - 17775 (+)
Gene ID: Rep_2083_c_33_19
Type: pfam
Location: 17821 - 18717 (+)
Type: pfam
Location: 17821 - 18717 (+)
Gene ID: Rep_2083_c_33_20
Type: TC
Location: 18745 - 19698 (+)
Type: TC
Location: 18745 - 19698 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Brotaphodocola
Species
Brotaphodocola sp003478505
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.