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Cluster: Rep_2083_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2083_c_14 Rep_2083_c_14_83 64282 65004 - 3.A.1.3.15
TC Rep_2083_c_14 Rep_2083_c_14_84 64988 65656 - 3.A.1.3.15
TC Rep_2083_c_14 Rep_2083_c_14_85 65679 66560 - 3.A.1.3.15
CAZyme Rep_2083_c_14 Rep_2083_c_14_86 66820 67689 + CE4
CAZyme Rep_2083_c_14 Rep_2083_c_14_87 67686 68522 + CE4
pfam Rep_2083_c_14 Rep_2083_c_14_88 68515 69909 + MatE | MatE
STP Rep_2083_c_14 Rep_2083_c_14_89 69965 70549 + TetR_N
TC Rep_2083_c_14 Rep_2083_c_14_90 70805 72340 + 2.A.21.2.3
Gene ID: Rep_2083_c_14_83
Type: TC
Location: 64282 - 65004 (-)
Gene ID: Rep_2083_c_14_84
Type: TC
Location: 64988 - 65656 (-)
Gene ID: Rep_2083_c_14_85
Type: TC
Location: 65679 - 66560 (-)
Gene ID: Rep_2083_c_14_86
Type: CAZyme
Location: 66820 - 67689 (+)
Gene ID: Rep_2083_c_14_87
Type: CAZyme
Location: 67686 - 68522 (+)
Gene ID: Rep_2083_c_14_88
Type: pfam
Location: 68515 - 69909 (+)
Gene ID: Rep_2083_c_14_89
Type: STP
Location: 69965 - 70549 (+)
Gene ID: Rep_2083_c_14_90
Type: TC
Location: 70805 - 72340 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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