Cluster: Rep_2083_CGC13
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2083
- CGC Family ID: CGCFAM_03714
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2083_c_14 | Rep_2083_c_14_72 | 54884 | 55534 | + | 1.C.113.1.3 |
| pfam | Rep_2083_c_14 | Rep_2083_c_14_73 | 55574 | 55852 | - | GIY-YIG |
| CAZyme | Rep_2083_c_14 | Rep_2083_c_14_74 | 56056 | 57612 | - | CBM50 |
Gene ID: Rep_2083_c_14_72
Type: TC
Location: 54884 - 55534 (+)
Type: TC
Location: 54884 - 55534 (+)
Gene ID: Rep_2083_c_14_73
Type: pfam
Location: 55574 - 55852 (-)
Type: pfam
Location: 55574 - 55852 (-)
Gene ID: Rep_2083_c_14_74
Type: CAZyme
Location: 56056 - 57612 (-)
Type: CAZyme
Location: 56056 - 57612 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Brotaphodocola
Species
Brotaphodocola sp003478505
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.