Cluster: Rep_2083_CGC12
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2083
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2083_c_12 | Rep_2083_c_12_3 | 1292 | 4639 | - | 2.A.56.1.1 |
| pfam | Rep_2083_c_12 | Rep_2083_c_12_4 | 4636 | 5196 | - | DctQ |
| CAZyme | Rep_2083_c_12 | Rep_2083_c_12_5 | 5535 | 6554 | - | GT2 |
Gene ID: Rep_2083_c_12_3
Type: TC
Location: 1292 - 4639 (-)
Type: TC
Location: 1292 - 4639 (-)
Gene ID: Rep_2083_c_12_4
Type: pfam
Location: 4636 - 5196 (-)
Type: pfam
Location: 4636 - 5196 (-)
Gene ID: Rep_2083_c_12_5
Type: CAZyme
Location: 5535 - 6554 (-)
Type: CAZyme
Location: 5535 - 6554 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Brotaphodocola
Species
Brotaphodocola sp003478505
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.