Cluster: Rep_2083_CGC11
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2083
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2083_c_11 | Rep_2083_c_11_31 | 26689 | 28350 | + | GH18 |
| pfam | Rep_2083_c_11 | Rep_2083_c_11_32 | 28387 | 29829 | + | Metallophos | CNP_C_terminal |
| pfam | Rep_2083_c_11 | Rep_2083_c_11_33 | 29855 | 30700 | + | Amidase_3 |
| TC | Rep_2083_c_11 | Rep_2083_c_11_34 | 31017 | 31658 | + | 2.A.87.1.3 |
Gene ID: Rep_2083_c_11_31
Type: CAZyme
Location: 26689 - 28350 (+)
Type: CAZyme
Location: 26689 - 28350 (+)
Gene ID: Rep_2083_c_11_32
Type: pfam
Location: 28387 - 29829 (+)
Type: pfam
Location: 28387 - 29829 (+)
Gene ID: Rep_2083_c_11_33
Type: pfam
Location: 29855 - 30700 (+)
Type: pfam
Location: 29855 - 30700 (+)
Gene ID: Rep_2083_c_11_34
Type: TC
Location: 31017 - 31658 (+)
Type: TC
Location: 31017 - 31658 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Brotaphodocola
Species
Brotaphodocola sp003478505
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_2083_c_11_32 | vegetarian > vegan | 1.34769 | 0.01684 |