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Cluster: Rep_2067_CGC62

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2067_c_56 Rep_2067_c_56_1 41 1285 - 2.A.1.24.4
pfam Rep_2067_c_56 Rep_2067_c_56_2 1337 2128 - Zn_dep_PLPC
TC Rep_2067_c_56 Rep_2067_c_56_3 2550 3518 + 3.A.1.1.10
TC Rep_2067_c_56 Rep_2067_c_56_4 3543 4466 + 3.A.1.1.29
pfam Rep_2067_c_56 Rep_2067_c_56_5 4537 6243 + DUF3502
CAZyme Rep_2067_c_56 Rep_2067_c_56_6 6544 8292 + GH35
Gene ID: Rep_2067_c_56_1
Type: TC
Location: 41 - 1285 (-)
Gene ID: Rep_2067_c_56_2
Type: pfam
Location: 1337 - 2128 (-)
Gene ID: Rep_2067_c_56_3
Type: TC
Location: 2550 - 3518 (+)
Gene ID: Rep_2067_c_56_4
Type: TC
Location: 3543 - 4466 (+)
Gene ID: Rep_2067_c_56_5
Type: pfam
Location: 4537 - 6243 (+)
Gene ID: Rep_2067_c_56_6
Type: CAZyme
Location: 6544 - 8292 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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