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Cluster: Rep_2067_CGC61

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2067_c_50 Rep_2067_c_50_16 18018 19403 + 2.A.66.1.13
STP Rep_2067_c_50 Rep_2067_c_50_17 19671 20447 + NTP_transf_2
TC Rep_2067_c_50 Rep_2067_c_50_18 20455 21807 + 2.A.66.1.33
peptidase Rep_2067_c_50 Rep_2067_c_50_19 21894 22922 + S66.UPW
TC Rep_2067_c_50 Rep_2067_c_50_20 22982 23845 - 2.A.115.1.5
TC Rep_2067_c_50 Rep_2067_c_50_21 24135 24845 - 3.D.10.1.1
TC Rep_2067_c_50 Rep_2067_c_50_22 24984 26612 - 3.D.10.1.1
NULL(UNKNOWN) Rep_2067_c_50 Rep_2067_c_50_23 26679 27218 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_2067_c_50 Rep_2067_c_50_24 27448 29682 + GH50
Gene ID: Rep_2067_c_50_16
Type: TC
Location: 18018 - 19403 (+)
Gene ID: Rep_2067_c_50_17
Type: STP
Location: 19671 - 20447 (+)
Gene ID: Rep_2067_c_50_18
Type: TC
Location: 20455 - 21807 (+)
Gene ID: Rep_2067_c_50_19
Type: peptidase
Location: 21894 - 22922 (+)
Gene ID: Rep_2067_c_50_20
Type: TC
Location: 22982 - 23845 (-)
Gene ID: Rep_2067_c_50_21
Type: TC
Location: 24135 - 24845 (-)
Gene ID: Rep_2067_c_50_22
Type: TC
Location: 24984 - 26612 (-)
Gene ID: Rep_2067_c_50_23
Type:
Location: 26679 - 27218 (-)
Gene ID: Rep_2067_c_50_24
Type: CAZyme
Location: 27448 - 29682 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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