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Cluster: Rep_2067_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2067_c_0 Rep_2067_c_0_84 94290 96350 + 3.A.1.120.6
peptidase Rep_2067_c_0 Rep_2067_c_0_85 96471 97343 + M24.UPA
pfam Rep_2067_c_0 Rep_2067_c_0_86 97453 99312 - tRNA-synt_2b | HGTP_anticodon | tRNA_edit
TC Rep_2067_c_0 Rep_2067_c_0_87 99786 100382 + 4.F.1.1.7
pfam Rep_2067_c_0 Rep_2067_c_0_88 100435 101058 + DUF1349 | GH43_C2
CAZyme Rep_2067_c_0 Rep_2067_c_0_89 101122 103089 - GH2
TC Rep_2067_c_0 Rep_2067_c_0_90 103291 104055 + 9.B.28.1.8
TC Rep_2067_c_0 Rep_2067_c_0_91 104065 105813 - 8.A.59.2.1
TF Rep_2067_c_0 Rep_2067_c_0_92 105819 107060 - HTH_AraC | HTH_AraC
pfam Rep_2067_c_0 Rep_2067_c_0_93 107311 108243 + BPD_transp_1
TC Rep_2067_c_0 Rep_2067_c_0_94 108254 109138 + 3.A.1.1.29
pfam Rep_2067_c_0 Rep_2067_c_0_95 109208 110866 + DUF3502
NULL(UNKNOWN) Rep_2067_c_0 Rep_2067_c_0_96 110935 112749 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_2067_c_0 Rep_2067_c_0_97 112781 113863 + GH105
CAZyme Rep_2067_c_0 Rep_2067_c_0_98 113869 115188 + GH28
CAZyme Rep_2067_c_0 Rep_2067_c_0_99 115185 117593 + GH94
CAZyme Rep_2067_c_0 Rep_2067_c_0_100 117628 118755 + CE17
pfam Rep_2067_c_0 Rep_2067_c_0_101 118967 119233 + SpoIIID
TC Rep_2067_c_0 Rep_2067_c_0_102 119353 120765 + 2.A.66.1.23
Gene ID: Rep_2067_c_0_84
Type: TC
Location: 94290 - 96350 (+)
Gene ID: Rep_2067_c_0_85
Type: peptidase
Location: 96471 - 97343 (+)
Gene ID: Rep_2067_c_0_86
Type: pfam
Location: 97453 - 99312 (-)
Gene ID: Rep_2067_c_0_87
Type: TC
Location: 99786 - 100382 (+)
Gene ID: Rep_2067_c_0_88
Type: pfam
Location: 100435 - 101058 (+)
Gene ID: Rep_2067_c_0_89
Type: CAZyme
Location: 101122 - 103089 (-)
Gene ID: Rep_2067_c_0_90
Type: TC
Location: 103291 - 104055 (+)
Gene ID: Rep_2067_c_0_91
Type: TC
Location: 104065 - 105813 (-)
Gene ID: Rep_2067_c_0_92
Type: TF
Location: 105819 - 107060 (-)
Gene ID: Rep_2067_c_0_93
Type: pfam
Location: 107311 - 108243 (+)
Gene ID: Rep_2067_c_0_94
Type: TC
Location: 108254 - 109138 (+)
Gene ID: Rep_2067_c_0_95
Type: pfam
Location: 109208 - 110866 (+)
Gene ID: Rep_2067_c_0_96
Type:
Location: 110935 - 112749 (+)
Gene ID: Rep_2067_c_0_97
Type: CAZyme
Location: 112781 - 113863 (+)
Gene ID: Rep_2067_c_0_98
Type: CAZyme
Location: 113869 - 115188 (+)
Gene ID: Rep_2067_c_0_99
Type: CAZyme
Location: 115185 - 117593 (+)
Gene ID: Rep_2067_c_0_100
Type: CAZyme
Location: 117628 - 118755 (+)
Gene ID: Rep_2067_c_0_101
Type: pfam
Location: 118967 - 119233 (+)
Gene ID: Rep_2067_c_0_102
Type: TC
Location: 119353 - 120765 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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