Cluster: Rep_2067_CGC59
🧬 Cluster Details
- Gene Count: 18
- CAZyme Count: 5
- Substrate:
- Genome ID: Rep_2067
- CGC Family ID: CGCFAM_04823
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2067_c_47 | Rep_2067_c_47_1 | 325 | 2727 | + | GH31_15 |
| pfam | Rep_2067_c_47 | Rep_2067_c_47_2 | 2819 | 3775 | + | 2-Hacid_dh | 2-Hacid_dh_C |
| NULL(UNKNOWN) | Rep_2067_c_47 | Rep_2067_c_47_3 | 3792 | 5423 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_2067_c_47 | Rep_2067_c_47_4 | 5807 | 7480 | + | 3.A.1.1.9 |
| NULL(UNKNOWN) | Rep_2067_c_47 | Rep_2067_c_47_5 | 7641 | 9275 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_2067_c_47 | Rep_2067_c_47_6 | 9302 | 10858 | + | GH43_10 |
| CAZyme | Rep_2067_c_47 | Rep_2067_c_47_7 | 10927 | 13335 | + | GH28 |
| TF | Rep_2067_c_47 | Rep_2067_c_47_8 | 13378 | 14382 | - | LacI |
| TC | Rep_2067_c_47 | Rep_2067_c_47_9 | 14728 | 15666 | + | 3.A.1.1.10 |
| TC | Rep_2067_c_47 | Rep_2067_c_47_10 | 15715 | 16611 | + | 3.A.1.1.29 |
| TC | Rep_2067_c_47 | Rep_2067_c_47_11 | 16674 | 18347 | + | 3.A.1.1.9 |
| CAZyme | Rep_2067_c_47 | Rep_2067_c_47_12 | 18383 | 19873 | + | GH32 |
| CAZyme | Rep_2067_c_47 | Rep_2067_c_47_13 | 19877 | 21229 | - | GH29 |
| TC | Rep_2067_c_47 | Rep_2067_c_47_14 | 21226 | 23061 | - | 8.A.59.2.1 |
| TF | Rep_2067_c_47 | Rep_2067_c_47_15 | 23051 | 24121 | - | HTH_AraC | HTH_AraC |
| sulfatase | Rep_2067_c_47 | Rep_2067_c_47_16 | 24344 | 25795 | + | S1_95 |
| TC | Rep_2067_c_47 | Rep_2067_c_47_17 | 25900 | 26814 | + | 3.A.1.1.29 |
| TC | Rep_2067_c_47 | Rep_2067_c_47_18 | 26829 | 27749 | + | 3.A.1.1.29 |
Gene ID: Rep_2067_c_47_1
Type: CAZyme
Location: 325 - 2727 (+)
Type: CAZyme
Location: 325 - 2727 (+)
Gene ID: Rep_2067_c_47_2
Type: pfam
Location: 2819 - 3775 (+)
Type: pfam
Location: 2819 - 3775 (+)
Gene ID: Rep_2067_c_47_3
Type:
Location: 3792 - 5423 (+)
Type:
Location: 3792 - 5423 (+)
Gene ID: Rep_2067_c_47_4
Type: TC
Location: 5807 - 7480 (+)
Type: TC
Location: 5807 - 7480 (+)
Gene ID: Rep_2067_c_47_5
Type:
Location: 7641 - 9275 (+)
Type:
Location: 7641 - 9275 (+)
Gene ID: Rep_2067_c_47_6
Type: CAZyme
Location: 9302 - 10858 (+)
Type: CAZyme
Location: 9302 - 10858 (+)
Gene ID: Rep_2067_c_47_7
Type: CAZyme
Location: 10927 - 13335 (+)
Type: CAZyme
Location: 10927 - 13335 (+)
Gene ID: Rep_2067_c_47_8
Type: TF
Location: 13378 - 14382 (-)
Type: TF
Location: 13378 - 14382 (-)
Gene ID: Rep_2067_c_47_9
Type: TC
Location: 14728 - 15666 (+)
Type: TC
Location: 14728 - 15666 (+)
Gene ID: Rep_2067_c_47_10
Type: TC
Location: 15715 - 16611 (+)
Type: TC
Location: 15715 - 16611 (+)
Gene ID: Rep_2067_c_47_11
Type: TC
Location: 16674 - 18347 (+)
Type: TC
Location: 16674 - 18347 (+)
Gene ID: Rep_2067_c_47_12
Type: CAZyme
Location: 18383 - 19873 (+)
Type: CAZyme
Location: 18383 - 19873 (+)
Gene ID: Rep_2067_c_47_13
Type: CAZyme
Location: 19877 - 21229 (-)
Type: CAZyme
Location: 19877 - 21229 (-)
Gene ID: Rep_2067_c_47_14
Type: TC
Location: 21226 - 23061 (-)
Type: TC
Location: 21226 - 23061 (-)
Gene ID: Rep_2067_c_47_15
Type: TF
Location: 23051 - 24121 (-)
Type: TF
Location: 23051 - 24121 (-)
Gene ID: Rep_2067_c_47_16
Type: sulfatase
Location: 24344 - 25795 (+)
Type: sulfatase
Location: 24344 - 25795 (+)
Gene ID: Rep_2067_c_47_17
Type: TC
Location: 25900 - 26814 (+)
Type: TC
Location: 25900 - 26814 (+)
Gene ID: Rep_2067_c_47_18
Type: TC
Location: 26829 - 27749 (+)
Type: TC
Location: 26829 - 27749 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Eisenbergiella
Species
Eisenbergiella stercoravium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.