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Cluster: Rep_2067_CGC52

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_2067_c_36 Rep_2067_c_36_24 26358 27509 - CE9
sulfatase Rep_2067_c_36 Rep_2067_c_36_25 27570 28295 - S1_9
STP Rep_2067_c_36 Rep_2067_c_36_26 28529 28786 - PTS-HPr
TC Rep_2067_c_36 Rep_2067_c_36_27 28957 30573 - 8.A.7.1.1
pfam Rep_2067_c_36 Rep_2067_c_36_28 31004 31915 + Lipase_GDSL | Lipase_GDSL_2 | Lipase_GDSL_lke
pfam Rep_2067_c_36 Rep_2067_c_36_29 32059 33012 + Lipase_GDSL | Lipase_GDSL_2 | Lipase_GDSL_lke
TC Rep_2067_c_36 Rep_2067_c_36_30 33170 34549 - 3.A.1.122.7
NULL(UNKNOWN) Rep_2067_c_36 Rep_2067_c_36_31 34565 36301 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_2067_c_36 Rep_2067_c_36_32 36298 37008 - 3.A.1.122.14
Gene ID: Rep_2067_c_36_24
Type: CAZyme
Location: 26358 - 27509 (-)
Gene ID: Rep_2067_c_36_25
Type: sulfatase
Location: 27570 - 28295 (-)
Gene ID: Rep_2067_c_36_26
Type: STP
Location: 28529 - 28786 (-)
Gene ID: Rep_2067_c_36_27
Type: TC
Location: 28957 - 30573 (-)
Gene ID: Rep_2067_c_36_28
Type: pfam
Location: 31004 - 31915 (+)
Gene ID: Rep_2067_c_36_29
Type: pfam
Location: 32059 - 33012 (+)
Gene ID: Rep_2067_c_36_30
Type: TC
Location: 33170 - 34549 (-)
Gene ID: Rep_2067_c_36_31
Type:
Location: 34565 - 36301 (-)
Gene ID: Rep_2067_c_36_32
Type: TC
Location: 36298 - 37008 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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