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Cluster: Rep_2067_CGC48

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2067_c_32 Rep_2067_c_32_1 1 1422 + 8.A.59.2.1
STP Rep_2067_c_32 Rep_2067_c_32_2 1579 2238 + SBP_bac_1
pfam Rep_2067_c_32 Rep_2067_c_32_3 2320 2934 + SBP_bac_8
TC Rep_2067_c_32 Rep_2067_c_32_4 3051 4454 + 3.A.1.1.27
TC Rep_2067_c_32 Rep_2067_c_32_5 4454 5338 + 3.A.1.1.27
CAZyme Rep_2067_c_32 Rep_2067_c_32_6 5359 7050 + GH13_36
TC Rep_2067_c_32 Rep_2067_c_32_7 7066 8814 + 3.A.1.1.9
Gene ID: Rep_2067_c_32_1
Type: TC
Location: 1 - 1422 (+)
Gene ID: Rep_2067_c_32_2
Type: STP
Location: 1579 - 2238 (+)
Gene ID: Rep_2067_c_32_3
Type: pfam
Location: 2320 - 2934 (+)
Gene ID: Rep_2067_c_32_4
Type: TC
Location: 3051 - 4454 (+)
Gene ID: Rep_2067_c_32_5
Type: TC
Location: 4454 - 5338 (+)
Gene ID: Rep_2067_c_32_6
Type: CAZyme
Location: 5359 - 7050 (+)
Gene ID: Rep_2067_c_32_7
Type: TC
Location: 7066 - 8814 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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