dbCAN Logo

Cluster: Rep_2067_CGC45

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2067_c_28 Rep_2067_c_28_1 133 1197 + 2.A.21.9.2
TC Rep_2067_c_28 Rep_2067_c_28_2 1270 1953 + 3.A.1.125.3
pfam Rep_2067_c_28 Rep_2067_c_28_3 1950 3758 + FtsX | FtsX | MacB_PCD
CAZyme Rep_2067_c_28 Rep_2067_c_28_4 3766 5526 - CBM34 | GH13_20
CAZyme Rep_2067_c_28 Rep_2067_c_28_5 5630 7096 - GH77
CAZyme Rep_2067_c_28 Rep_2067_c_28_6 7114 9375 - GT35
CAZyme Rep_2067_c_28 Rep_2067_c_28_7 9498 11756 - GH133
CAZyme Rep_2067_c_28 Rep_2067_c_28_8 11762 13708 - GH13_14
TC Rep_2067_c_28 Rep_2067_c_28_9 13891 14763 - 3.A.1.1.27
TC Rep_2067_c_28 Rep_2067_c_28_10 14767 16152 - 3.A.1.1.27
Gene ID: Rep_2067_c_28_1
Type: TC
Location: 133 - 1197 (+)
Gene ID: Rep_2067_c_28_2
Type: TC
Location: 1270 - 1953 (+)
Gene ID: Rep_2067_c_28_3
Type: pfam
Location: 1950 - 3758 (+)
Gene ID: Rep_2067_c_28_4
Type: CAZyme
Location: 3766 - 5526 (-)
Gene ID: Rep_2067_c_28_5
Type: CAZyme
Location: 5630 - 7096 (-)
Gene ID: Rep_2067_c_28_6
Type: CAZyme
Location: 7114 - 9375 (-)
Gene ID: Rep_2067_c_28_7
Type: CAZyme
Location: 9498 - 11756 (-)
Gene ID: Rep_2067_c_28_8
Type: CAZyme
Location: 11762 - 13708 (-)
Gene ID: Rep_2067_c_28_9
Type: TC
Location: 13891 - 14763 (-)
Gene ID: Rep_2067_c_28_10
Type: TC
Location: 14767 - 16152 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List