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Cluster: Rep_2067_CGC44

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2067_c_26 Rep_2067_c_26_25 33463 35061 - 3.A.1.106.15
TC Rep_2067_c_26 Rep_2067_c_26_26 35077 36723 - 3.A.1.120.5
TC Rep_2067_c_26 Rep_2067_c_26_27 36683 38491 - 3.A.1.111.2
TC Rep_2067_c_26 Rep_2067_c_26_28 38495 40261 - 3.A.1.111.2
TC Rep_2067_c_26 Rep_2067_c_26_29 40258 41907 - 3.A.1.112.3
TC Rep_2067_c_26 Rep_2067_c_26_30 41904 43628 - 3.A.1.106.15
CAZyme Rep_2067_c_26 Rep_2067_c_26_31 43645 45540 - GH51_1
TC Rep_2067_c_26 Rep_2067_c_26_32 45652 46566 - 3.A.1.1.29
TC Rep_2067_c_26 Rep_2067_c_26_33 46585 47523 - 3.A.1.1.29
pfam Rep_2067_c_26 Rep_2067_c_26_34 47623 49371 - SBP_bac_1
TF Rep_2067_c_26 Rep_2067_c_26_35 49590 50327 - HTH_AraC | HTH_AraC
TC Rep_2067_c_26 Rep_2067_c_26_36 50302 52122 - 8.A.59.2.1
Gene ID: Rep_2067_c_26_25
Type: TC
Location: 33463 - 35061 (-)
Gene ID: Rep_2067_c_26_26
Type: TC
Location: 35077 - 36723 (-)
Gene ID: Rep_2067_c_26_27
Type: TC
Location: 36683 - 38491 (-)
Gene ID: Rep_2067_c_26_28
Type: TC
Location: 38495 - 40261 (-)
Gene ID: Rep_2067_c_26_29
Type: TC
Location: 40258 - 41907 (-)
Gene ID: Rep_2067_c_26_30
Type: TC
Location: 41904 - 43628 (-)
Gene ID: Rep_2067_c_26_31
Type: CAZyme
Location: 43645 - 45540 (-)
Gene ID: Rep_2067_c_26_32
Type: TC
Location: 45652 - 46566 (-)
Gene ID: Rep_2067_c_26_33
Type: TC
Location: 46585 - 47523 (-)
Gene ID: Rep_2067_c_26_34
Type: pfam
Location: 47623 - 49371 (-)
Gene ID: Rep_2067_c_26_35
Type: TF
Location: 49590 - 50327 (-)
Gene ID: Rep_2067_c_26_36
Type: TC
Location: 50302 - 52122 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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