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Cluster: Rep_2067_CGC42

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_2067_c_24 Rep_2067_c_24_5 6319 8412 + GH36
CAZyme Rep_2067_c_24 Rep_2067_c_24_6 8631 9593 + GH43_22
TC Rep_2067_c_24 Rep_2067_c_24_7 9598 11319 + 8.A.59.2.1
TF Rep_2067_c_24 Rep_2067_c_24_8 11294 12946 + 0035607 | 0036286
TC Rep_2067_c_24 Rep_2067_c_24_9 12948 14774 + 3.A.1.1.9
TC Rep_2067_c_24 Rep_2067_c_24_10 15045 15974 + 3.A.1.1.10
TC Rep_2067_c_24 Rep_2067_c_24_11 15986 16909 + 3.A.1.1.29
STP Rep_2067_c_24 Rep_2067_c_24_12 16970 18598 + SBP_bac_1
CAZyme Rep_2067_c_24 Rep_2067_c_24_13 18748 21603 + GH2
NULL(UNKNOWN) Rep_2067_c_24 Rep_2067_c_24_14 21600 22535 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_2067_c_24 Rep_2067_c_24_15 22609 24822 + GH35
TC Rep_2067_c_24 Rep_2067_c_24_16 25046 26395 + 3.A.1.1.28
TC Rep_2067_c_24 Rep_2067_c_24_17 26488 27357 + 3.A.1.1.20
TC Rep_2067_c_24 Rep_2067_c_24_18 27382 28215 + 3.A.1.1.34
CAZyme Rep_2067_c_24 Rep_2067_c_24_19 28239 30809 + GH97
TC Rep_2067_c_24 Rep_2067_c_24_20 30894 32708 + 9.B.33.1.1
TF Rep_2067_c_24 Rep_2067_c_24_21 32686 34134 + HTH_AraC
CAZyme Rep_2067_c_24 Rep_2067_c_24_22 34325 37126 + GH2
Gene ID: Rep_2067_c_24_5
Type: CAZyme
Location: 6319 - 8412 (+)
Gene ID: Rep_2067_c_24_6
Type: CAZyme
Location: 8631 - 9593 (+)
Gene ID: Rep_2067_c_24_7
Type: TC
Location: 9598 - 11319 (+)
Gene ID: Rep_2067_c_24_8
Type: TF
Location: 11294 - 12946 (+)
Gene ID: Rep_2067_c_24_9
Type: TC
Location: 12948 - 14774 (+)
Gene ID: Rep_2067_c_24_10
Type: TC
Location: 15045 - 15974 (+)
Gene ID: Rep_2067_c_24_11
Type: TC
Location: 15986 - 16909 (+)
Gene ID: Rep_2067_c_24_12
Type: STP
Location: 16970 - 18598 (+)
Gene ID: Rep_2067_c_24_13
Type: CAZyme
Location: 18748 - 21603 (+)
Gene ID: Rep_2067_c_24_14
Type:
Location: 21600 - 22535 (+)
Gene ID: Rep_2067_c_24_15
Type: CAZyme
Location: 22609 - 24822 (+)
Gene ID: Rep_2067_c_24_16
Type: TC
Location: 25046 - 26395 (+)
Gene ID: Rep_2067_c_24_17
Type: TC
Location: 26488 - 27357 (+)
Gene ID: Rep_2067_c_24_18
Type: TC
Location: 27382 - 28215 (+)
Gene ID: Rep_2067_c_24_19
Type: CAZyme
Location: 28239 - 30809 (+)
Gene ID: Rep_2067_c_24_20
Type: TC
Location: 30894 - 32708 (+)
Gene ID: Rep_2067_c_24_21
Type: TF
Location: 32686 - 34134 (+)
Gene ID: Rep_2067_c_24_22
Type: CAZyme
Location: 34325 - 37126 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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