Cluster: Rep_2067_CGC39
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 5
- Substrate:
- Genome ID: Rep_2067
- CGC Family ID: CGCFAM_00009
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2067_c_20 | Rep_2067_c_20_26 | 27488 | 28918 | - | 2.A.50.2.1 |
| STP | Rep_2067_c_20 | Rep_2067_c_20_27 | 28945 | 30771 | - | SIS | SIS |
| CAZyme | Rep_2067_c_20 | Rep_2067_c_20_28 | 30839 | 31774 | - | GT2 |
| pfam | Rep_2067_c_20 | Rep_2067_c_20_29 | 31915 | 33225 | - | LytR_cpsA_psr |
| TC | Rep_2067_c_20 | Rep_2067_c_20_30 | 33252 | 34679 | - | 9.B.18.1.1 |
| CAZyme | Rep_2067_c_20 | Rep_2067_c_20_31 | 34863 | 35822 | - | GT2 |
| CAZyme | Rep_2067_c_20 | Rep_2067_c_20_32 | 35947 | 37290 | - | GT2 |
| pfam | Rep_2067_c_20 | Rep_2067_c_20_33 | 37515 | 39239 | - | PGM_PMM_I | PGM_PMM_II | PGM_PMM_III |
| CAZyme | Rep_2067_c_20 | Rep_2067_c_20_34 | 39550 | 41502 | - | GT2 | GT2 |
| CAZyme | Rep_2067_c_20 | Rep_2067_c_20_35 | 41562 | 43553 | - | GT2 |
| pfam | Rep_2067_c_20 | Rep_2067_c_20_36 | 43550 | 45712 | - | Methyltransf_11 | Methyltransf_25 |
| TC | Rep_2067_c_20 | Rep_2067_c_20_37 | 45823 | 47217 | - | 3.A.1.103.6 |
| TC | Rep_2067_c_20 | Rep_2067_c_20_38 | 47430 | 48452 | - | 3.A.1.104.1 |
Gene ID: Rep_2067_c_20_26
Type: TC
Location: 27488 - 28918 (-)
Type: TC
Location: 27488 - 28918 (-)
Gene ID: Rep_2067_c_20_27
Type: STP
Location: 28945 - 30771 (-)
Type: STP
Location: 28945 - 30771 (-)
Gene ID: Rep_2067_c_20_28
Type: CAZyme
Location: 30839 - 31774 (-)
Type: CAZyme
Location: 30839 - 31774 (-)
Gene ID: Rep_2067_c_20_29
Type: pfam
Location: 31915 - 33225 (-)
Type: pfam
Location: 31915 - 33225 (-)
Gene ID: Rep_2067_c_20_30
Type: TC
Location: 33252 - 34679 (-)
Type: TC
Location: 33252 - 34679 (-)
Gene ID: Rep_2067_c_20_31
Type: CAZyme
Location: 34863 - 35822 (-)
Type: CAZyme
Location: 34863 - 35822 (-)
Gene ID: Rep_2067_c_20_32
Type: CAZyme
Location: 35947 - 37290 (-)
Type: CAZyme
Location: 35947 - 37290 (-)
Gene ID: Rep_2067_c_20_33
Type: pfam
Location: 37515 - 39239 (-)
Type: pfam
Location: 37515 - 39239 (-)
Gene ID: Rep_2067_c_20_34
Type: CAZyme
Location: 39550 - 41502 (-)
Type: CAZyme
Location: 39550 - 41502 (-)
Gene ID: Rep_2067_c_20_35
Type: CAZyme
Location: 41562 - 43553 (-)
Type: CAZyme
Location: 41562 - 43553 (-)
Gene ID: Rep_2067_c_20_36
Type: pfam
Location: 43550 - 45712 (-)
Type: pfam
Location: 43550 - 45712 (-)
Gene ID: Rep_2067_c_20_37
Type: TC
Location: 45823 - 47217 (-)
Type: TC
Location: 45823 - 47217 (-)
Gene ID: Rep_2067_c_20_38
Type: TC
Location: 47430 - 48452 (-)
Type: TC
Location: 47430 - 48452 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Eisenbergiella
Species
Eisenbergiella stercoravium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.