dbCAN Logo

Cluster: Rep_2067_CGC38

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2067_c_19 Rep_2067_c_19_38 46862 47830 + 3.A.1.14.15
pfam Rep_2067_c_19 Rep_2067_c_19_39 47827 48801 + FecCD
TC Rep_2067_c_19 Rep_2067_c_19_40 48864 49616 + 3.A.1.14.7
STP Rep_2067_c_19 Rep_2067_c_19_41 49699 50835 + Peripla_BP_2
CAZyme Rep_2067_c_19 Rep_2067_c_19_42 51004 54702 - GH115
TF Rep_2067_c_19 Rep_2067_c_19_43 54892 55803 + HTH_AraC
pfam Rep_2067_c_19 Rep_2067_c_19_44 55772 57085 - MOFRL | DUF4147
TC Rep_2067_c_19 Rep_2067_c_19_45 57078 58064 - 3.A.1.141.1
Gene ID: Rep_2067_c_19_38
Type: TC
Location: 46862 - 47830 (+)
Gene ID: Rep_2067_c_19_39
Type: pfam
Location: 47827 - 48801 (+)
Gene ID: Rep_2067_c_19_40
Type: TC
Location: 48864 - 49616 (+)
Gene ID: Rep_2067_c_19_41
Type: STP
Location: 49699 - 50835 (+)
Gene ID: Rep_2067_c_19_42
Type: CAZyme
Location: 51004 - 54702 (-)
Gene ID: Rep_2067_c_19_43
Type: TF
Location: 54892 - 55803 (+)
Gene ID: Rep_2067_c_19_44
Type: pfam
Location: 55772 - 57085 (-)
Gene ID: Rep_2067_c_19_45
Type: TC
Location: 57078 - 58064 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List