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Cluster: Rep_2067_CGC36

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_2067_c_17 Rep_2067_c_17_17 15268 16260 - GH105
NULL(UNKNOWN) Rep_2067_c_17 Rep_2067_c_17_18 16694 17179 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_2067_c_17 Rep_2067_c_17_19 17194 17529 + 3.A.1.141.1
pfam Rep_2067_c_17 Rep_2067_c_17_20 17626 18402 + ABC2_membrane_6
CAZyme Rep_2067_c_17 Rep_2067_c_17_21 18598 19647 + CE15
Gene ID: Rep_2067_c_17_17
Type: CAZyme
Location: 15268 - 16260 (-)
Gene ID: Rep_2067_c_17_18
Type:
Location: 16694 - 17179 (+)
Gene ID: Rep_2067_c_17_19
Type: TC
Location: 17194 - 17529 (+)
Gene ID: Rep_2067_c_17_20
Type: pfam
Location: 17626 - 18402 (+)
Gene ID: Rep_2067_c_17_21
Type: CAZyme
Location: 18598 - 19647 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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