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Cluster: Rep_2067_CGC32

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_2067_c_13 Rep_2067_c_13_4 3074 3838 + CE4
pfam Rep_2067_c_13 Rep_2067_c_13_5 3969 4514 + Acetyltransf_1 | Acetyltransf_7 | Acetyltransf_10
TC Rep_2067_c_13 Rep_2067_c_13_6 4511 5107 + 2.A.115.2.14
TC Rep_2067_c_13 Rep_2067_c_13_7 5215 6111 + 3.A.1.3.25
TC Rep_2067_c_13 Rep_2067_c_13_8 6224 6898 + 3.A.1.3.25
TC Rep_2067_c_13 Rep_2067_c_13_9 6885 7628 + 3.A.1.3.25
peptidase Rep_2067_c_13 Rep_2067_c_13_10 7646 8350 + C26.UPW
TC Rep_2067_c_13 Rep_2067_c_13_11 8338 9612 + 2.A.85.4.3
Gene ID: Rep_2067_c_13_4
Type: CAZyme
Location: 3074 - 3838 (+)
Gene ID: Rep_2067_c_13_5
Type: pfam
Location: 3969 - 4514 (+)
Gene ID: Rep_2067_c_13_6
Type: TC
Location: 4511 - 5107 (+)
Gene ID: Rep_2067_c_13_7
Type: TC
Location: 5215 - 6111 (+)
Gene ID: Rep_2067_c_13_8
Type: TC
Location: 6224 - 6898 (+)
Gene ID: Rep_2067_c_13_9
Type: TC
Location: 6885 - 7628 (+)
Gene ID: Rep_2067_c_13_10
Type: peptidase
Location: 7646 - 8350 (+)
Gene ID: Rep_2067_c_13_11
Type: TC
Location: 8338 - 9612 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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