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Cluster: Rep_2067_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2067_c_8 Rep_2067_c_8_45 43428 44864 - 2.A.38.1.1
TC Rep_2067_c_8 Rep_2067_c_8_46 44894 46252 - 2.A.38.1.1
NULL(UNKNOWN) Rep_2067_c_8 Rep_2067_c_8_47 46351 46971 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_2067_c_8 Rep_2067_c_8_48 47190 49259 - GH127
TF Rep_2067_c_8 Rep_2067_c_8_49 49566 50441 + HTH_AraC
pfam Rep_2067_c_8 Rep_2067_c_8_50 50508 50816 + Lys_export
TC Rep_2067_c_8 Rep_2067_c_8_51 50813 51415 + 2.A.124.1.3
CAZyme Rep_2067_c_8 Rep_2067_c_8_52 51624 53621 - GH31_4
Gene ID: Rep_2067_c_8_45
Type: TC
Location: 43428 - 44864 (-)
Gene ID: Rep_2067_c_8_46
Type: TC
Location: 44894 - 46252 (-)
Gene ID: Rep_2067_c_8_47
Type:
Location: 46351 - 46971 (-)
Gene ID: Rep_2067_c_8_48
Type: CAZyme
Location: 47190 - 49259 (-)
Gene ID: Rep_2067_c_8_49
Type: TF
Location: 49566 - 50441 (+)
Gene ID: Rep_2067_c_8_50
Type: pfam
Location: 50508 - 50816 (+)
Gene ID: Rep_2067_c_8_51
Type: TC
Location: 50813 - 51415 (+)
Gene ID: Rep_2067_c_8_52
Type: CAZyme
Location: 51624 - 53621 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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