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Cluster: Rep_2067_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2067_c_6 Rep_2067_c_6_10 9183 10055 - 3.A.1.5.20
TC Rep_2067_c_6 Rep_2067_c_6_11 10080 11027 - 3.A.1.5.20
TC Rep_2067_c_6 Rep_2067_c_6_12 11020 12126 - 3.A.1.5.34
TC Rep_2067_c_6 Rep_2067_c_6_13 12099 13070 - 3.A.1.5.20
TC Rep_2067_c_6 Rep_2067_c_6_14 13178 14860 - 3.A.1.5.27
NULL(UNKNOWN) Rep_2067_c_6 Rep_2067_c_6_15 15388 15999 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_2067_c_6 Rep_2067_c_6_16 16102 17820 - GH123
CAZyme Rep_2067_c_6 Rep_2067_c_6_17 17899 19890 - PL27
Gene ID: Rep_2067_c_6_10
Type: TC
Location: 9183 - 10055 (-)
Gene ID: Rep_2067_c_6_11
Type: TC
Location: 10080 - 11027 (-)
Gene ID: Rep_2067_c_6_12
Type: TC
Location: 11020 - 12126 (-)
Gene ID: Rep_2067_c_6_13
Type: TC
Location: 12099 - 13070 (-)
Gene ID: Rep_2067_c_6_14
Type: TC
Location: 13178 - 14860 (-)
Gene ID: Rep_2067_c_6_15
Type:
Location: 15388 - 15999 (+)
Gene ID: Rep_2067_c_6_16
Type: CAZyme
Location: 16102 - 17820 (-)
Gene ID: Rep_2067_c_6_17
Type: CAZyme
Location: 17899 - 19890 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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