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Cluster: Rep_2067_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2067_c_2 Rep_2067_c_2_30 31706 32764 - 9.A.11.1.1
CAZyme Rep_2067_c_2 Rep_2067_c_2_31 33263 34714 + GH13_5
pfam Rep_2067_c_2 Rep_2067_c_2_32 34792 35451 - Hexapep | Mac | Hexapep_2
TC Rep_2067_c_2 Rep_2067_c_2_33 35860 36315 - 9.A.11.1.1
pfam Rep_2067_c_2 Rep_2067_c_2_34 36500 37432 - Mem_trans | Mem_trans
pfam Rep_2067_c_2 Rep_2067_c_2_35 37526 38593 + EutH
CAZyme Rep_2067_c_2 Rep_2067_c_2_36 38680 39612 - GH43_24
pfam Rep_2067_c_2 Rep_2067_c_2_37 39797 42415 - DUF5695
CAZyme Rep_2067_c_2 Rep_2067_c_2_38 42437 44356 - GH127
TC Rep_2067_c_2 Rep_2067_c_2_39 44390 45280 - 3.A.1.1.29
TC Rep_2067_c_2 Rep_2067_c_2_40 45290 46231 - 3.A.1.1.10
Gene ID: Rep_2067_c_2_30
Type: TC
Location: 31706 - 32764 (-)
Gene ID: Rep_2067_c_2_31
Type: CAZyme
Location: 33263 - 34714 (+)
Gene ID: Rep_2067_c_2_32
Type: pfam
Location: 34792 - 35451 (-)
Gene ID: Rep_2067_c_2_33
Type: TC
Location: 35860 - 36315 (-)
Gene ID: Rep_2067_c_2_34
Type: pfam
Location: 36500 - 37432 (-)
Gene ID: Rep_2067_c_2_35
Type: pfam
Location: 37526 - 38593 (+)
Gene ID: Rep_2067_c_2_36
Type: CAZyme
Location: 38680 - 39612 (-)
Gene ID: Rep_2067_c_2_37
Type: pfam
Location: 39797 - 42415 (-)
Gene ID: Rep_2067_c_2_38
Type: CAZyme
Location: 42437 - 44356 (-)
Gene ID: Rep_2067_c_2_39
Type: TC
Location: 44390 - 45280 (-)
Gene ID: Rep_2067_c_2_40
Type: TC
Location: 45290 - 46231 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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