Cluster: Rep_2060_CGC99
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2060
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2060_c_77 | Rep_2060_c_77_15 | 12524 | 13702 | - | GH88 |
| TC | Rep_2060_c_77 | Rep_2060_c_77_16 | 13789 | 14616 | - | 3.A.1.1.36 |
| TC | Rep_2060_c_77 | Rep_2060_c_77_17 | 14631 | 15530 | - | 3.A.1.1.11 |
| TC | Rep_2060_c_77 | Rep_2060_c_77_18 | 15725 | 17056 | - | 3.A.1.1.7 |
| TF | Rep_2060_c_77 | Rep_2060_c_77_19 | 17207 | 18820 | - | HTH_AraC | HTH_AraC |
| TC | Rep_2060_c_77 | Rep_2060_c_77_20 | 18835 | 20619 | - | 8.A.59.2.1 |
Gene ID: Rep_2060_c_77_15
Type: CAZyme
Location: 12524 - 13702 (-)
Type: CAZyme
Location: 12524 - 13702 (-)
Gene ID: Rep_2060_c_77_16
Type: TC
Location: 13789 - 14616 (-)
Type: TC
Location: 13789 - 14616 (-)
Gene ID: Rep_2060_c_77_17
Type: TC
Location: 14631 - 15530 (-)
Type: TC
Location: 14631 - 15530 (-)
Gene ID: Rep_2060_c_77_18
Type: TC
Location: 15725 - 17056 (-)
Type: TC
Location: 15725 - 17056 (-)
Gene ID: Rep_2060_c_77_19
Type: TF
Location: 17207 - 18820 (-)
Type: TF
Location: 17207 - 18820 (-)
Gene ID: Rep_2060_c_77_20
Type: TC
Location: 18835 - 20619 (-)
Type: TC
Location: 18835 - 20619 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900539655
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.