Cluster: Rep_2060_CGC97
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_2060
- CGC Family ID: CGCFAM_01201
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2060_c_72 | Rep_2060_c_72_1 | 22 | 894 | + | 3.A.1.1.28 |
| TC | Rep_2060_c_72 | Rep_2060_c_72_2 | 891 | 1715 | + | 3.A.1.1.28 |
| CAZyme | Rep_2060_c_72 | Rep_2060_c_72_3 | 1755 | 3086 | + | GH29 |
| CAZyme | Rep_2060_c_72 | Rep_2060_c_72_4 | 3183 | 8627 | + | GH146 |
| CAZyme | Rep_2060_c_72 | Rep_2060_c_72_5 | 8834 | 11890 | + | GH146 |
| TC | Rep_2060_c_72 | Rep_2060_c_72_6 | 11887 | 13698 | + | 8.A.59.2.1 |
Gene ID: Rep_2060_c_72_1
Type: TC
Location: 22 - 894 (+)
Type: TC
Location: 22 - 894 (+)
Gene ID: Rep_2060_c_72_2
Type: TC
Location: 891 - 1715 (+)
Type: TC
Location: 891 - 1715 (+)
Gene ID: Rep_2060_c_72_3
Type: CAZyme
Location: 1755 - 3086 (+)
Type: CAZyme
Location: 1755 - 3086 (+)
Gene ID: Rep_2060_c_72_4
Type: CAZyme
Location: 3183 - 8627 (+)
Type: CAZyme
Location: 3183 - 8627 (+)
Gene ID: Rep_2060_c_72_5
Type: CAZyme
Location: 8834 - 11890 (+)
Type: CAZyme
Location: 8834 - 11890 (+)
Gene ID: Rep_2060_c_72_6
Type: TC
Location: 11887 - 13698 (+)
Type: TC
Location: 11887 - 13698 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900539655
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.