Cluster: Rep_2060_CGC96
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2060
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2060_c_71 | Rep_2060_c_71_21 | 28663 | 30651 | + | CBM20 | GH13_1 |
| CAZyme | Rep_2060_c_71 | Rep_2060_c_71_22 | 30742 | 32613 | - | CBM34 | GH13_20 |
| TC | Rep_2060_c_71 | Rep_2060_c_71_23 | 32623 | 33468 | - | 3.A.1.1.6 |
| TC | Rep_2060_c_71 | Rep_2060_c_71_24 | 33468 | 34355 | - | 3.A.1.1.2 |
Gene ID: Rep_2060_c_71_21
Type: CAZyme
Location: 28663 - 30651 (+)
Type: CAZyme
Location: 28663 - 30651 (+)
Gene ID: Rep_2060_c_71_22
Type: CAZyme
Location: 30742 - 32613 (-)
Type: CAZyme
Location: 30742 - 32613 (-)
Gene ID: Rep_2060_c_71_23
Type: TC
Location: 32623 - 33468 (-)
Type: TC
Location: 32623 - 33468 (-)
Gene ID: Rep_2060_c_71_24
Type: TC
Location: 33468 - 34355 (-)
Type: TC
Location: 33468 - 34355 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900539655
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.