Cluster: Rep_2060_CGC95
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2060
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2060_c_69 | Rep_2060_c_69_29 | 28015 | 30711 | - | GH106 |
| TC | Rep_2060_c_69 | Rep_2060_c_69_30 | 30730 | 31572 | - | 3.A.1.1.46 |
| TC | Rep_2060_c_69 | Rep_2060_c_69_31 | 31572 | 32555 | - | 3.A.1.1.41 |
| STP | Rep_2060_c_69 | Rep_2060_c_69_32 | 32629 | 34056 | - | SBP_bac_1 |
| CAZyme | Rep_2060_c_69 | Rep_2060_c_69_33 | 34546 | 36639 | + | GH151 |
Gene ID: Rep_2060_c_69_29
Type: CAZyme
Location: 28015 - 30711 (-)
Type: CAZyme
Location: 28015 - 30711 (-)
Gene ID: Rep_2060_c_69_30
Type: TC
Location: 30730 - 31572 (-)
Type: TC
Location: 30730 - 31572 (-)
Gene ID: Rep_2060_c_69_31
Type: TC
Location: 31572 - 32555 (-)
Type: TC
Location: 31572 - 32555 (-)
Gene ID: Rep_2060_c_69_32
Type: STP
Location: 32629 - 34056 (-)
Type: STP
Location: 32629 - 34056 (-)
Gene ID: Rep_2060_c_69_33
Type: CAZyme
Location: 34546 - 36639 (+)
Type: CAZyme
Location: 34546 - 36639 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900539655
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.