Cluster: Rep_2060_CGC94
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2060
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2060_c_66 | Rep_2060_c_66_27 | 29430 | 30872 | + | GH32 |
| TC | Rep_2060_c_66 | Rep_2060_c_66_28 | 30916 | 32286 | + | 3.A.1.1.24 |
| TC | Rep_2060_c_66 | Rep_2060_c_66_29 | 32394 | 33323 | + | 3.A.1.1.32 |
| TC | Rep_2060_c_66 | Rep_2060_c_66_30 | 33320 | 34147 | + | 3.A.1.1.47 |
| CAZyme | Rep_2060_c_66 | Rep_2060_c_66_31 | 34173 | 35288 | + | GH172 |
Gene ID: Rep_2060_c_66_27
Type: CAZyme
Location: 29430 - 30872 (+)
Type: CAZyme
Location: 29430 - 30872 (+)
Gene ID: Rep_2060_c_66_28
Type: TC
Location: 30916 - 32286 (+)
Type: TC
Location: 30916 - 32286 (+)
Gene ID: Rep_2060_c_66_29
Type: TC
Location: 32394 - 33323 (+)
Type: TC
Location: 32394 - 33323 (+)
Gene ID: Rep_2060_c_66_30
Type: TC
Location: 33320 - 34147 (+)
Type: TC
Location: 33320 - 34147 (+)
Gene ID: Rep_2060_c_66_31
Type: CAZyme
Location: 34173 - 35288 (+)
Type: CAZyme
Location: 34173 - 35288 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900539655
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.