Cluster: Rep_2060_CGC90
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2060
- CGC Family ID: CGCFAM_04178
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2060_c_61 | Rep_2060_c_61_11 | 10345 | 12516 | - | GH112 |
| TC | Rep_2060_c_61 | Rep_2060_c_61_12 | 12537 | 14339 | - | 8.A.59.2.1 |
| TF | Rep_2060_c_61 | Rep_2060_c_61_13 | 14358 | 15878 | - | HTH_AraC | HTH_AraC |
| TC | Rep_2060_c_61 | Rep_2060_c_61_14 | 16044 | 16859 | - | 3.A.1.1.48 |
| TC | Rep_2060_c_61 | Rep_2060_c_61_15 | 16861 | 17769 | - | 3.A.1.1.34 |
Gene ID: Rep_2060_c_61_11
Type: CAZyme
Location: 10345 - 12516 (-)
Type: CAZyme
Location: 10345 - 12516 (-)
Gene ID: Rep_2060_c_61_12
Type: TC
Location: 12537 - 14339 (-)
Type: TC
Location: 12537 - 14339 (-)
Gene ID: Rep_2060_c_61_13
Type: TF
Location: 14358 - 15878 (-)
Type: TF
Location: 14358 - 15878 (-)
Gene ID: Rep_2060_c_61_14
Type: TC
Location: 16044 - 16859 (-)
Type: TC
Location: 16044 - 16859 (-)
Gene ID: Rep_2060_c_61_15
Type: TC
Location: 16861 - 17769 (-)
Type: TC
Location: 16861 - 17769 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900539655
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.