Cluster: Rep_2060_CGC88
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2060
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2060_c_59 | Rep_2060_c_59_16 | 15244 | 17700 | - | GT35 |
| pfam | Rep_2060_c_59 | Rep_2060_c_59_17 | 17727 | 20846 | - | tRNA-synt_1 | Anticodon_1 | tRNA-synt_1g | tRNA-synt_1g | DUF5915 |
| TC | Rep_2060_c_59 | Rep_2060_c_59_18 | 21461 | 22192 | + | 9.B.28.1.2 |
Gene ID: Rep_2060_c_59_16
Type: CAZyme
Location: 15244 - 17700 (-)
Type: CAZyme
Location: 15244 - 17700 (-)
Gene ID: Rep_2060_c_59_17
Type: pfam
Location: 17727 - 20846 (-)
Type: pfam
Location: 17727 - 20846 (-)
Gene ID: Rep_2060_c_59_18
Type: TC
Location: 21461 - 22192 (+)
Type: TC
Location: 21461 - 22192 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900539655
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.