Cluster: Rep_2060_CGC87
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2060
- CGC Family ID: CGCFAM_01817
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2060_c_58 | Rep_2060_c_58_2 | 1362 | 2411 | - | GH179 |
| STP | Rep_2060_c_58 | Rep_2060_c_58_3 | 2510 | 3562 | - | Peripla_BP_1 |
| TC | Rep_2060_c_58 | Rep_2060_c_58_4 | 3659 | 5191 | - | 3.A.1.2.3 |
| TC | Rep_2060_c_58 | Rep_2060_c_58_5 | 5163 | 6140 | - | 3.A.1.2.19 |
| NULL(UNKNOWN) | Rep_2060_c_58 | Rep_2060_c_58_6 | 6152 | 7108 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_2060_c_58 | Rep_2060_c_58_7 | 7166 | 7876 | - | CE14 |
Gene ID: Rep_2060_c_58_2
Type: CAZyme
Location: 1362 - 2411 (-)
Type: CAZyme
Location: 1362 - 2411 (-)
Gene ID: Rep_2060_c_58_3
Type: STP
Location: 2510 - 3562 (-)
Type: STP
Location: 2510 - 3562 (-)
Gene ID: Rep_2060_c_58_4
Type: TC
Location: 3659 - 5191 (-)
Type: TC
Location: 3659 - 5191 (-)
Gene ID: Rep_2060_c_58_5
Type: TC
Location: 5163 - 6140 (-)
Type: TC
Location: 5163 - 6140 (-)
Gene ID: Rep_2060_c_58_6
Type:
Location: 6152 - 7108 (-)
Type:
Location: 6152 - 7108 (-)
Gene ID: Rep_2060_c_58_7
Type: CAZyme
Location: 7166 - 7876 (-)
Type: CAZyme
Location: 7166 - 7876 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900539655
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.