Cluster: Rep_2060_CGC86
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2060
- CGC Family ID: CGCFAM_03475
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2060_c_57 | Rep_2060_c_57_22 | 26911 | 28998 | - | 3.A.16.1.2 |
| pfam | Rep_2060_c_57 | Rep_2060_c_57_23 | 29195 | 30673 | + | DUF1846 | DUF1846_C |
| STP | Rep_2060_c_57 | Rep_2060_c_57_24 | 31072 | 32676 | + | CbiA |
| CAZyme | Rep_2060_c_57 | Rep_2060_c_57_25 | 32966 | 39289 | - | CBM32 | GH95 |
| pfam | Rep_2060_c_57 | Rep_2060_c_57_26 | 39817 | 40422 | + | CBM9_2 |
| sulfatase | Rep_2060_c_57 | Rep_2060_c_57_27 | 40482 | 41216 | + | S1_9 |
| CAZyme | Rep_2060_c_57 | Rep_2060_c_57_28 | 41239 | 42357 | + | CE9 |
Gene ID: Rep_2060_c_57_22
Type: TC
Location: 26911 - 28998 (-)
Type: TC
Location: 26911 - 28998 (-)
Gene ID: Rep_2060_c_57_23
Type: pfam
Location: 29195 - 30673 (+)
Type: pfam
Location: 29195 - 30673 (+)
Gene ID: Rep_2060_c_57_24
Type: STP
Location: 31072 - 32676 (+)
Type: STP
Location: 31072 - 32676 (+)
Gene ID: Rep_2060_c_57_25
Type: CAZyme
Location: 32966 - 39289 (-)
Type: CAZyme
Location: 32966 - 39289 (-)
Gene ID: Rep_2060_c_57_26
Type: pfam
Location: 39817 - 40422 (+)
Type: pfam
Location: 39817 - 40422 (+)
Gene ID: Rep_2060_c_57_27
Type: sulfatase
Location: 40482 - 41216 (+)
Type: sulfatase
Location: 40482 - 41216 (+)
Gene ID: Rep_2060_c_57_28
Type: CAZyme
Location: 41239 - 42357 (+)
Type: CAZyme
Location: 41239 - 42357 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900539655
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.