Cluster: Rep_2060_CGC85
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2060
- CGC Family ID: CGCFAM_00159
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2060_c_56 | Rep_2060_c_56_20 | 26566 | 27204 | + | 9.B.158.1.3 |
| CAZyme | Rep_2060_c_56 | Rep_2060_c_56_21 | 27291 | 28835 | - | GH2 |
| TC | Rep_2060_c_56 | Rep_2060_c_56_22 | 29302 | 30702 | - | 2.A.2.3.1 |
| CAZyme | Rep_2060_c_56 | Rep_2060_c_56_23 | 30751 | 32697 | - | GH2 |
Gene ID: Rep_2060_c_56_20
Type: TC
Location: 26566 - 27204 (+)
Type: TC
Location: 26566 - 27204 (+)
Gene ID: Rep_2060_c_56_21
Type: CAZyme
Location: 27291 - 28835 (-)
Type: CAZyme
Location: 27291 - 28835 (-)
Gene ID: Rep_2060_c_56_22
Type: TC
Location: 29302 - 30702 (-)
Type: TC
Location: 29302 - 30702 (-)
Gene ID: Rep_2060_c_56_23
Type: CAZyme
Location: 30751 - 32697 (-)
Type: CAZyme
Location: 30751 - 32697 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900539655
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.