Cluster: Rep_2060_CGC83
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2060
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2060_c_51 | Rep_2060_c_51_33 | 38538 | 41066 | - | 3.A.3.30.4 |
| pfam | Rep_2060_c_51 | Rep_2060_c_51_34 | 41487 | 42284 | + | adh_short | adh_short_C2 |
| TF | Rep_2060_c_51 | Rep_2060_c_51_35 | 42555 | 43442 | + | HTH_AraC |
| CAZyme | Rep_2060_c_51 | Rep_2060_c_51_36 | 43529 | 45526 | + | GH31_4 |
Gene ID: Rep_2060_c_51_33
Type: TC
Location: 38538 - 41066 (-)
Type: TC
Location: 38538 - 41066 (-)
Gene ID: Rep_2060_c_51_34
Type: pfam
Location: 41487 - 42284 (+)
Type: pfam
Location: 41487 - 42284 (+)
Gene ID: Rep_2060_c_51_35
Type: TF
Location: 42555 - 43442 (+)
Type: TF
Location: 42555 - 43442 (+)
Gene ID: Rep_2060_c_51_36
Type: CAZyme
Location: 43529 - 45526 (+)
Type: CAZyme
Location: 43529 - 45526 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900539655
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.