Cluster: Rep_2060_CGC82
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2060
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2060_c_51 | Rep_2060_c_51_17 | 19367 | 22180 | - | CBM67 | GH78 |
| TC | Rep_2060_c_51 | Rep_2060_c_51_18 | 22272 | 23144 | - | 3.A.1.1.18 |
| TC | Rep_2060_c_51 | Rep_2060_c_51_19 | 23134 | 24063 | - | 3.A.1.1.7 |
| STP | Rep_2060_c_51 | Rep_2060_c_51_20 | 24378 | 25748 | - | SBP_bac_1 |
| TF | Rep_2060_c_51 | Rep_2060_c_51_21 | 25906 | 27474 | - | HTH_AraC |
| TC | Rep_2060_c_51 | Rep_2060_c_51_22 | 27590 | 29353 | - | 9.B.33.1.1 |
Gene ID: Rep_2060_c_51_17
Type: CAZyme
Location: 19367 - 22180 (-)
Type: CAZyme
Location: 19367 - 22180 (-)
Gene ID: Rep_2060_c_51_18
Type: TC
Location: 22272 - 23144 (-)
Type: TC
Location: 22272 - 23144 (-)
Gene ID: Rep_2060_c_51_19
Type: TC
Location: 23134 - 24063 (-)
Type: TC
Location: 23134 - 24063 (-)
Gene ID: Rep_2060_c_51_20
Type: STP
Location: 24378 - 25748 (-)
Type: STP
Location: 24378 - 25748 (-)
Gene ID: Rep_2060_c_51_21
Type: TF
Location: 25906 - 27474 (-)
Type: TF
Location: 25906 - 27474 (-)
Gene ID: Rep_2060_c_51_22
Type: TC
Location: 27590 - 29353 (-)
Type: TC
Location: 27590 - 29353 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900539655
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.