Cluster: Rep_2060_CGC80
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2060
- CGC Family ID: CGCFAM_07574
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2060_c_48 | Rep_2060_c_48_15 | 21856 | 25830 | + | 8.A.59.4.1 |
| TF | Rep_2060_c_48 | Rep_2060_c_48_16 | 26012 | 26869 | - | HTH_AraC | HTH_AraC |
| CAZyme | Rep_2060_c_48 | Rep_2060_c_48_17 | 27137 | 30205 | + | GH2 |
| TC | Rep_2060_c_48 | Rep_2060_c_48_18 | 30442 | 31884 | + | 2.A.66.1.34 |
| pfam | Rep_2060_c_48 | Rep_2060_c_48_19 | 31931 | 32563 | + | YhhN |
| TC | Rep_2060_c_48 | Rep_2060_c_48_20 | 32700 | 33278 | + | 9.B.156.3.1 |
| CAZyme | Rep_2060_c_48 | Rep_2060_c_48_21 | 33699 | 41093 | + | GH101 |
Gene ID: Rep_2060_c_48_15
Type: TC
Location: 21856 - 25830 (+)
Type: TC
Location: 21856 - 25830 (+)
Gene ID: Rep_2060_c_48_16
Type: TF
Location: 26012 - 26869 (-)
Type: TF
Location: 26012 - 26869 (-)
Gene ID: Rep_2060_c_48_17
Type: CAZyme
Location: 27137 - 30205 (+)
Type: CAZyme
Location: 27137 - 30205 (+)
Gene ID: Rep_2060_c_48_18
Type: TC
Location: 30442 - 31884 (+)
Type: TC
Location: 30442 - 31884 (+)
Gene ID: Rep_2060_c_48_19
Type: pfam
Location: 31931 - 32563 (+)
Type: pfam
Location: 31931 - 32563 (+)
Gene ID: Rep_2060_c_48_20
Type: TC
Location: 32700 - 33278 (+)
Type: TC
Location: 32700 - 33278 (+)
Gene ID: Rep_2060_c_48_21
Type: CAZyme
Location: 33699 - 41093 (+)
Type: CAZyme
Location: 33699 - 41093 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900539655
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.