Cluster: Rep_2060_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2060
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2060_c_3 | Rep_2060_c_3_5 | 11100 | 12854 | - | 8.A.59.2.1 |
| TF | Rep_2060_c_3 | Rep_2060_c_3_6 | 12851 | 14470 | - | HTH_AraC | HTH_AraC |
| pfam | Rep_2060_c_3 | Rep_2060_c_3_7 | 14655 | 15602 | - | Peptidase_C39_2 |
| CAZyme | Rep_2060_c_3 | Rep_2060_c_3_8 | 15688 | 17949 | - | GT35 |
Gene ID: Rep_2060_c_3_5
Type: TC
Location: 11100 - 12854 (-)
Type: TC
Location: 11100 - 12854 (-)
Gene ID: Rep_2060_c_3_6
Type: TF
Location: 12851 - 14470 (-)
Type: TF
Location: 12851 - 14470 (-)
Gene ID: Rep_2060_c_3_7
Type: pfam
Location: 14655 - 15602 (-)
Type: pfam
Location: 14655 - 15602 (-)
Gene ID: Rep_2060_c_3_8
Type: CAZyme
Location: 15688 - 17949 (-)
Type: CAZyme
Location: 15688 - 17949 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900539655
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.