Cluster: Rep_2060_CGC79
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2060
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2060_c_47 | Rep_2060_c_47_20 | 20185 | 21801 | + | GH78 |
| TC | Rep_2060_c_47 | Rep_2060_c_47_21 | 21842 | 22672 | - | 3.A.1.23.2 |
| TC | Rep_2060_c_47 | Rep_2060_c_47_22 | 22669 | 23529 | - | 3.A.1.26.7 |
| pfam | Rep_2060_c_47 | Rep_2060_c_47_23 | 23517 | 24323 | - | CbiQ |
| TC | Rep_2060_c_47 | Rep_2060_c_47_24 | 24468 | 25070 | - | 3.A.1.28.1 |
Gene ID: Rep_2060_c_47_20
Type: CAZyme
Location: 20185 - 21801 (+)
Type: CAZyme
Location: 20185 - 21801 (+)
Gene ID: Rep_2060_c_47_21
Type: TC
Location: 21842 - 22672 (-)
Type: TC
Location: 21842 - 22672 (-)
Gene ID: Rep_2060_c_47_22
Type: TC
Location: 22669 - 23529 (-)
Type: TC
Location: 22669 - 23529 (-)
Gene ID: Rep_2060_c_47_23
Type: pfam
Location: 23517 - 24323 (-)
Type: pfam
Location: 23517 - 24323 (-)
Gene ID: Rep_2060_c_47_24
Type: TC
Location: 24468 - 25070 (-)
Type: TC
Location: 24468 - 25070 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900539655
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.