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Cluster: Rep_2060_CGC70

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2060_c_39 Rep_2060_c_39_2 170 1021 + 3.A.1.5.2
TC Rep_2060_c_39 Rep_2060_c_39_3 1047 2036 + 3.A.1.5.37
TC Rep_2060_c_39 Rep_2060_c_39_4 2039 2653 + 3.A.1.5.3
pfam Rep_2060_c_39 Rep_2060_c_39_5 2793 3263 - DUF4358
pfam Rep_2060_c_39 Rep_2060_c_39_6 3275 4309 - Lipase_GDSL_2
TC Rep_2060_c_39 Rep_2060_c_39_7 4455 5876 + 2.A.50.2.1
pfam Rep_2060_c_39 Rep_2060_c_39_8 5922 7160 + DHHW | ALGX
CAZyme Rep_2060_c_39 Rep_2060_c_39_9 7222 8190 + GH109
Gene ID: Rep_2060_c_39_2
Type: TC
Location: 170 - 1021 (+)
Gene ID: Rep_2060_c_39_3
Type: TC
Location: 1047 - 2036 (+)
Gene ID: Rep_2060_c_39_4
Type: TC
Location: 2039 - 2653 (+)
Gene ID: Rep_2060_c_39_5
Type: pfam
Location: 2793 - 3263 (-)
Gene ID: Rep_2060_c_39_6
Type: pfam
Location: 3275 - 4309 (-)
Gene ID: Rep_2060_c_39_7
Type: TC
Location: 4455 - 5876 (+)
Gene ID: Rep_2060_c_39_8
Type: pfam
Location: 5922 - 7160 (+)
Gene ID: Rep_2060_c_39_9
Type: CAZyme
Location: 7222 - 8190 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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