Cluster: Rep_2060_CGC68
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_2060
- CGC Family ID: CGCFAM_00663
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2060_c_38 | Rep_2060_c_38_1 | 309 | 2147 | - | 9.B.33.1.1 |
| CAZyme | Rep_2060_c_38 | Rep_2060_c_38_2 | 2576 | 5602 | + | CBM67 | GH78 |
| CAZyme | Rep_2060_c_38 | Rep_2060_c_38_3 | 5693 | 7963 | + | GH3 |
| TC | Rep_2060_c_38 | Rep_2060_c_38_4 | 7991 | 9415 | + | 2.A.2.3.2 |
| TF | Rep_2060_c_38 | Rep_2060_c_38_5 | 9382 | 10611 | - | HTH_AraC | HTH_AraC |
| CAZyme | Rep_2060_c_38 | Rep_2060_c_38_6 | 10805 | 13546 | + | CBM67 | GH78 |
Gene ID: Rep_2060_c_38_1
Type: TC
Location: 309 - 2147 (-)
Type: TC
Location: 309 - 2147 (-)
Gene ID: Rep_2060_c_38_2
Type: CAZyme
Location: 2576 - 5602 (+)
Type: CAZyme
Location: 2576 - 5602 (+)
Gene ID: Rep_2060_c_38_3
Type: CAZyme
Location: 5693 - 7963 (+)
Type: CAZyme
Location: 5693 - 7963 (+)
Gene ID: Rep_2060_c_38_4
Type: TC
Location: 7991 - 9415 (+)
Type: TC
Location: 7991 - 9415 (+)
Gene ID: Rep_2060_c_38_5
Type: TF
Location: 9382 - 10611 (-)
Type: TF
Location: 9382 - 10611 (-)
Gene ID: Rep_2060_c_38_6
Type: CAZyme
Location: 10805 - 13546 (+)
Type: CAZyme
Location: 10805 - 13546 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900539655
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.