Cluster: Rep_2060_CGC65
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2060
- CGC Family ID: CGCFAM_02634
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2060_c_35 | Rep_2060_c_35_36 | 43938 | 46130 | + | GH36 |
| TC | Rep_2060_c_35 | Rep_2060_c_35_37 | 46243 | 46890 | - | 9.B.28.1.3 |
| TC | Rep_2060_c_35 | Rep_2060_c_35_38 | 47752 | 49116 | + | 3.A.1.1.44 |
| TC | Rep_2060_c_35 | Rep_2060_c_35_39 | 49390 | 50286 | + | 3.A.1.1.20 |
| TC | Rep_2060_c_35 | Rep_2060_c_35_40 | 50301 | 51131 | + | 3.A.1.1.36 |
Gene ID: Rep_2060_c_35_36
Type: CAZyme
Location: 43938 - 46130 (+)
Type: CAZyme
Location: 43938 - 46130 (+)
Gene ID: Rep_2060_c_35_37
Type: TC
Location: 46243 - 46890 (-)
Type: TC
Location: 46243 - 46890 (-)
Gene ID: Rep_2060_c_35_38
Type: TC
Location: 47752 - 49116 (+)
Type: TC
Location: 47752 - 49116 (+)
Gene ID: Rep_2060_c_35_39
Type: TC
Location: 49390 - 50286 (+)
Type: TC
Location: 49390 - 50286 (+)
Gene ID: Rep_2060_c_35_40
Type: TC
Location: 50301 - 51131 (+)
Type: TC
Location: 50301 - 51131 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900539655
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.