Cluster: Rep_2060_CGC64
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2060
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2060_c_35 | Rep_2060_c_35_15 | 15475 | 19659 | + | CBM67 | GH78 |
| TC | Rep_2060_c_35 | Rep_2060_c_35_16 | 19797 | 21893 | + | 4.A.3.2.8 |
| NULL(UNKNOWN) | Rep_2060_c_35 | Rep_2060_c_35_17 | 21956 | 22120 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | Rep_2060_c_35 | Rep_2060_c_35_18 | 22332 | 24572 | + | EAL | GGDEF | dCache_1 |
| TC | Rep_2060_c_35 | Rep_2060_c_35_19 | 24671 | 25555 | - | 2.A.7.3.40 |
Gene ID: Rep_2060_c_35_15
Type: CAZyme
Location: 15475 - 19659 (+)
Type: CAZyme
Location: 15475 - 19659 (+)
Gene ID: Rep_2060_c_35_16
Type: TC
Location: 19797 - 21893 (+)
Type: TC
Location: 19797 - 21893 (+)
Gene ID: Rep_2060_c_35_17
Type:
Location: 21956 - 22120 (-)
Type:
Location: 21956 - 22120 (-)
Gene ID: Rep_2060_c_35_18
Type: STP
Location: 22332 - 24572 (+)
Type: STP
Location: 22332 - 24572 (+)
Gene ID: Rep_2060_c_35_19
Type: TC
Location: 24671 - 25555 (-)
Type: TC
Location: 24671 - 25555 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900539655
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.