Cluster: Rep_2060_CGC60
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2060
- CGC Family ID: CGCFAM_02593
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2060_c_33 | Rep_2060_c_33_1 | 116 | 2350 | - | GH31_3 |
| TC | Rep_2060_c_33 | Rep_2060_c_33_2 | 2450 | 3106 | - | 9.B.28.1.8 |
| CAZyme | Rep_2060_c_33 | Rep_2060_c_33_3 | 3181 | 5175 | - | GH31_4 |
| TC | Rep_2060_c_33 | Rep_2060_c_33_4 | 5254 | 6123 | - | 3.A.1.1.6 |
| TC | Rep_2060_c_33 | Rep_2060_c_33_5 | 6125 | 7018 | - | 3.A.1.1.41 |
| STP | Rep_2060_c_33 | Rep_2060_c_33_6 | 7065 | 8477 | - | SBP_bac_1 |
| TF | Rep_2060_c_33 | Rep_2060_c_33_7 | 8670 | 9410 | - | HTH_AraC | HTH_AraC |
| TC | Rep_2060_c_33 | Rep_2060_c_33_8 | 9391 | 11241 | - | 8.A.59.2.1 |
Gene ID: Rep_2060_c_33_1
Type: CAZyme
Location: 116 - 2350 (-)
Type: CAZyme
Location: 116 - 2350 (-)
Gene ID: Rep_2060_c_33_2
Type: TC
Location: 2450 - 3106 (-)
Type: TC
Location: 2450 - 3106 (-)
Gene ID: Rep_2060_c_33_3
Type: CAZyme
Location: 3181 - 5175 (-)
Type: CAZyme
Location: 3181 - 5175 (-)
Gene ID: Rep_2060_c_33_4
Type: TC
Location: 5254 - 6123 (-)
Type: TC
Location: 5254 - 6123 (-)
Gene ID: Rep_2060_c_33_5
Type: TC
Location: 6125 - 7018 (-)
Type: TC
Location: 6125 - 7018 (-)
Gene ID: Rep_2060_c_33_6
Type: STP
Location: 7065 - 8477 (-)
Type: STP
Location: 7065 - 8477 (-)
Gene ID: Rep_2060_c_33_7
Type: TF
Location: 8670 - 9410 (-)
Type: TF
Location: 8670 - 9410 (-)
Gene ID: Rep_2060_c_33_8
Type: TC
Location: 9391 - 11241 (-)
Type: TC
Location: 9391 - 11241 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900539655
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.