Cluster: Rep_2060_CGC6
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2060
- CGC Family ID: CGCFAM_05000
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2060_c_1 | Rep_2060_c_1_26 | 33070 | 33957 | + | 3.A.1.1.20 |
| TC | Rep_2060_c_1 | Rep_2060_c_1_27 | 33968 | 34798 | + | 3.A.1.1.18 |
| CAZyme | Rep_2060_c_1 | Rep_2060_c_1_28 | 34832 | 37429 | + | GH116 |
| TF | Rep_2060_c_1 | Rep_2060_c_1_29 | 37500 | 38753 | - | HTH_AraC |
| TC | Rep_2060_c_1 | Rep_2060_c_1_30 | 38746 | 40545 | - | 8.A.59.2.1 |
Gene ID: Rep_2060_c_1_26
Type: TC
Location: 33070 - 33957 (+)
Type: TC
Location: 33070 - 33957 (+)
Gene ID: Rep_2060_c_1_27
Type: TC
Location: 33968 - 34798 (+)
Type: TC
Location: 33968 - 34798 (+)
Gene ID: Rep_2060_c_1_28
Type: CAZyme
Location: 34832 - 37429 (+)
Type: CAZyme
Location: 34832 - 37429 (+)
Gene ID: Rep_2060_c_1_29
Type: TF
Location: 37500 - 38753 (-)
Type: TF
Location: 37500 - 38753 (-)
Gene ID: Rep_2060_c_1_30
Type: TC
Location: 38746 - 40545 (-)
Type: TC
Location: 38746 - 40545 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900539655
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.